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SpectrumIdentificationItem Module

Types

Type Description

SpectrumIdentificationItem

Functions and values

Function or value Description

addOrUpDateInPlace param spectrumidentificationitem

Full Usage: addOrUpDateInPlace param spectrumidentificationitem

Parameters:
Returns: SpectrumIdentificationItem
param : CvParam
spectrumidentificationitem : SpectrumIdentificationItem
Returns: SpectrumIdentificationItem

createSpectrumIdentificationItem id spectrumidentificationresultid sampleid peptideid masstableid name passthreshold rank calculatedmasstocharge experimentalmasstocharge chargestate calculatedpi fragmentation rowversion

Full Usage: createSpectrumIdentificationItem id spectrumidentificationresultid sampleid peptideid masstableid name passthreshold rank calculatedmasstocharge experimentalmasstocharge chargestate calculatedpi fragmentation rowversion

Parameters:
    id : int
    spectrumidentificationresultid : int option
    sampleid : int option
    peptideid : int
    masstableid : int option
    name : string option
    passthreshold : string
    rank : int option
    calculatedmasstocharge : float option
    experimentalmasstocharge : float
    chargestate : int
    calculatedpi : float option
    fragmentation : DateTime option
    rowversion : DateTime

Returns: SpectrumIdentificationItem
id : int
spectrumidentificationresultid : int option
sampleid : int option
peptideid : int
masstableid : int option
name : string option
passthreshold : string
rank : int option
calculatedmasstocharge : float option
experimentalmasstocharge : float
chargestate : int
calculatedpi : float option
fragmentation : DateTime option
rowversion : DateTime
Returns: SpectrumIdentificationItem

createSpectrumIdentificationItemParamTable cn

Full Usage: createSpectrumIdentificationItemParamTable cn

Parameters:
Returns: int
cn : SQLiteConnection
Returns: int

createSpectrumIdentificationItemTable cn

Full Usage: createSpectrumIdentificationItemTable cn

Parameters:
Returns: int
cn : SQLiteConnection
Returns: int

createSpectrumIdentificationItemWith id spectrumidentificationresultid sampleid peptideid masstableid name passthreshold rank calculatedmasstocharge experimentalmasstocharge chargestate calculatedpi fragmentation rowversion cvParams

Full Usage: createSpectrumIdentificationItemWith id spectrumidentificationresultid sampleid peptideid masstableid name passthreshold rank calculatedmasstocharge experimentalmasstocharge chargestate calculatedpi fragmentation rowversion cvParams

Parameters:
    id : int
    spectrumidentificationresultid : int option
    sampleid : int option
    peptideid : int
    masstableid : int option
    name : string option
    passthreshold : string
    rank : int option
    calculatedmasstocharge : float option
    experimentalmasstocharge : float
    chargestate : int
    calculatedpi : float option
    fragmentation : DateTime option
    rowversion : DateTime
    cvParams : CvParam seq

Returns: SpectrumIdentificationItem
id : int
spectrumidentificationresultid : int option
sampleid : int option
peptideid : int
masstableid : int option
name : string option
passthreshold : string
rank : int option
calculatedmasstocharge : float option
experimentalmasstocharge : float
chargestate : int
calculatedpi : float option
fragmentation : DateTime option
rowversion : DateTime
cvParams : CvParam seq
Returns: SpectrumIdentificationItem

insertSpectrumIdentificationItemToDb insertInTableF insertInParamTableF spectrumidentificationitem

Full Usage: insertSpectrumIdentificationItemToDb insertInTableF insertInParamTableF spectrumidentificationitem

Parameters:
    insertInTableF : int -> int option -> int option -> int -> int option -> string option -> string -> int option -> float option -> float -> int -> float option -> DateTime option -> DateTime -> unit
    insertInParamTableF : ParamContainer -> 'a
    spectrumidentificationitem : SpectrumIdentificationItem

Returns: 'a
insertInTableF : int -> int option -> int option -> int -> int option -> string option -> string -> int option -> float option -> float -> int -> float option -> DateTime option -> DateTime -> unit
insertInParamTableF : ParamContainer -> 'a
spectrumidentificationitem : SpectrumIdentificationItem
Returns: 'a

prepareInsertSpectrumIdentificationItem cn tr

Full Usage: prepareInsertSpectrumIdentificationItem cn tr

Parameters:
Returns: 'a -> 'b -> 'c -> 'd -> 'e -> 'f -> 'g -> 'h -> 'i -> 'j -> 'k -> 'l -> 'm -> 'n -> int
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> 'b -> 'c -> 'd -> 'e -> 'f -> 'g -> 'h -> 'i -> 'j -> 'k -> 'l -> 'm -> 'n -> int

prepareInsertSpectrumIdentificationItemParam cn tr

Full Usage: prepareInsertSpectrumIdentificationItemParam cn tr

Parameters:
Returns: 'a -> 'b -> 'c -> 'd -> 'e -> 'f -> int
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> 'b -> 'c -> 'd -> 'e -> 'f -> int

prepareSelectSpectrumIdentificationItembyCalculatedMassToCharge cn tr

Full Usage: prepareSelectSpectrumIdentificationItembyCalculatedMassToCharge cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembyCalculatedPI cn tr

Full Usage: prepareSelectSpectrumIdentificationItembyCalculatedPI cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembyChargeState cn tr

Full Usage: prepareSelectSpectrumIdentificationItembyChargeState cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembyExperimentalMassToCharge cn tr

Full Usage: prepareSelectSpectrumIdentificationItembyExperimentalMassToCharge cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembyFragmentation cn tr

Full Usage: prepareSelectSpectrumIdentificationItembyFragmentation cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembyID cn tr

Full Usage: prepareSelectSpectrumIdentificationItembyID cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembyMassTableID cn tr

Full Usage: prepareSelectSpectrumIdentificationItembyMassTableID cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembyName cn tr

Full Usage: prepareSelectSpectrumIdentificationItembyName cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembyPassThreshold cn tr

Full Usage: prepareSelectSpectrumIdentificationItembyPassThreshold cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembyPeptideID cn tr

Full Usage: prepareSelectSpectrumIdentificationItembyPeptideID cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembyRank cn tr

Full Usage: prepareSelectSpectrumIdentificationItembyRank cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembyRowVersion cn tr

Full Usage: prepareSelectSpectrumIdentificationItembyRowVersion cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembySampleID cn tr

Full Usage: prepareSelectSpectrumIdentificationItembySampleID cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

prepareSelectSpectrumIdentificationItembySpectrumIdentificationResultID cn tr

Full Usage: prepareSelectSpectrumIdentificationItembySpectrumIdentificationResultID cn tr

Parameters:
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list
cn : SQLiteConnection
tr : SQLiteTransaction
Returns: 'a -> (int * int * int * int * int * string * string * int * float * float * int * float * DateTime * DateTime) list

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