FileOutputOptions (BioFSharp.Mz) | BioFSharp.Mz

BioFSharp.Mz

FileOutputOptions Type

Namespace: BioFSharp.Mz
Assembly: BioFSharp.Mz.dll
Parent Module: Parameters
Base Type: obj
All Interfaces: IEquatable<FileOutputOptions> , IStructuralEquatable

Union cases

Union case	Description
`IncludeDecoysInXML` Full Usage: `IncludeDecoysInXML`	Include decoys (PSMs, peptides and/or proteins) in the xml-output. Only available if -X is set.
`POUTTAB_DecoyPSMs FileInfo` Full Usage: `POUTTAB_DecoyPSMs FileInfo` Parameters: Item : `FileInfo`	Output tab delimited results for decoy PSMs into a file Item : `FileInfo`
`POUTTAB_DecoyPeptides FileInfo` Full Usage: `POUTTAB_DecoyPeptides FileInfo` Parameters: Item : `FileInfo`	Output tab delimited results for decoy peptides into a file (will be ignored if used with -U option). Item : `FileInfo`
`POUTTAB_DecoyProteins FileInfo` Full Usage: `POUTTAB_DecoyProteins FileInfo` Parameters: Item : `FileInfo`	Output tab delimited results for decoy proteins into a file (Only valid if option -A or -f is active) Item : `FileInfo`
`POUTTAB_Features FileInfo` Full Usage: `POUTTAB_Features FileInfo` Parameters: Item : `FileInfo`	Output computed features to given file in pin-tab format. Can be used to convert pin-xml to pin-tab. Item : `FileInfo`
`POUTTAB_PSMs FileInfo` Full Usage: `POUTTAB_PSMs FileInfo` Parameters: Item : `FileInfo`	Output tab delimited results of PSMs to a file instead of stdout. Item : `FileInfo`
`POUTTAB_Peptides FileInfo` Full Usage: `POUTTAB_Peptides FileInfo` Parameters: Item : `FileInfo`	Output tab delimited results of peptides to a file instead of stdout (will be ignored if used with -U option) Item : `FileInfo`
`POUTTAB_Proteins FileInfo` Full Usage: `POUTTAB_Proteins FileInfo` Parameters: Item : `FileInfo`	Output tab delimited results of proteins to a file instead of stdout (Only valid if option -A or -f is active) Item : `FileInfo`
`POUTXML FileInfo` Full Usage: `POUTXML FileInfo` Parameters: Item : `FileInfo`	Path to xml-output (pout) file. Item : `FileInfo`

Instance members

Instance member	Description
`this.IsIncludeDecoysInXML` Full Usage: `this.IsIncludeDecoysInXML` Returns: `bool`	Returns: `bool`
`this.IsPOUTTAB_DecoyPSMs` Full Usage: `this.IsPOUTTAB_DecoyPSMs` Returns: `bool`	Returns: `bool`
`this.IsPOUTTAB_DecoyPeptides` Full Usage: `this.IsPOUTTAB_DecoyPeptides` Returns: `bool`	Returns: `bool`
`this.IsPOUTTAB_DecoyProteins` Full Usage: `this.IsPOUTTAB_DecoyProteins` Returns: `bool`	Returns: `bool`
`this.IsPOUTTAB_Features` Full Usage: `this.IsPOUTTAB_Features` Returns: `bool`	Returns: `bool`
`this.IsPOUTTAB_PSMs` Full Usage: `this.IsPOUTTAB_PSMs` Returns: `bool`	Returns: `bool`
`this.IsPOUTTAB_Peptides` Full Usage: `this.IsPOUTTAB_Peptides` Returns: `bool`	Returns: `bool`
`this.IsPOUTTAB_Proteins` Full Usage: `this.IsPOUTTAB_Proteins` Returns: `bool`	Returns: `bool`
`this.IsPOUTXML` Full Usage: `this.IsPOUTXML` Returns: `bool`	Returns: `bool`